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GSP: genome size prediction software 1.06

 
GSP: genome size prediction software
Category: Utilities / Mac Utilities  
Author: gsizepred.sourceforge.net | Published: Apr 26, 2012
License: Freeware | O/S: Windows/Mac/Linux , BSD
Uninstaller: no








GSP program are based on Bayesian framework with an EM algorithm to predict genome size iteratively, which is elegant in mathematics. The model first develop under the no sequencing error model, then extend to the sequencing errors containing model. <br>fast calculate the K-mer frequency of the genome size<br>the EM iterative algorithm for the genome size predition<br>extra error model for real data

File Size: 120.2 KB   Price: $0.00   Downloads: 4
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... The Integrated Genome Browser (IGB, pronounced Ig-Bee) is an interactive, zoomable, scrollable software program you can use to visualize and explore genome-scale data sets, such as tiling array data, next-generation sequencing results, genome annotations, microarray designs, and the sequence itself. IGB is implemented using the Java programming language and should run on any computer. IGB is an open source, publicly-funded project, but it did not start out that way. Initial development of the ...
 
5.  jContigSort - Multimedia & Design/Graphic & Design
... jContigSort is is an useful Java-based instrument that was designed in order to help you sort genome contigs.Alignment of the assembled sequences to a reference genome is a common way to obtain a likely order for the contigs, though most of times the final decision is taken by the user. ...
 

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